In reply to pepe.

Scott,

Plugin Organizer does not break anything on it's own. A user has the potential to break their site and other plugins by configuring it incorrectly. As Pepe pointed out they can break their site by configuring a lot of plugins incorrectly.

FYI I added code to Plugin Organizer to deactivate your plugin after you introduced code in yours to delete my plugin and change the database options. It's too bad you refused to work with me from the beginning with the whole $_POST array bug your plugin introduced.